GGBN DNA Cloning Extension

http://data.ggbn.org/schemas/ggbn/terms/Cloning

Support for DNA Cloning as an extension for Material Sample core sample data in Darwin Core. Intended to be a one to many relation to the Material Sample core.

Link: http://terms.tdwg.org/wiki/GGBN_DNA_Cloning_Vocabulary


Properties



Cloning

cloningDate
Date when the DNA cloning was carried out
See also http://terms.tdwg.org/wiki/ggbn:cloningDate
Examples: 2014-05-18
Qualified Namehttp://data.ggbn.org/schemas/ggbn/terms/cloningDate
Namespacehttp://data.ggbn.org/schemas/ggbn/terms/
GroupCloning
Data Type string
Requiredfalse
cloningStaff
Person or Institution who performed the cloning
See also http://terms.tdwg.org/wiki/ggbn:cloningStaff
Examples: Jane Doe, NMNH
Qualified Namehttp://data.ggbn.org/schemas/ggbn/terms/cloningStaff
Namespacehttp://data.ggbn.org/schemas/ggbn/terms/
GroupCloning
Data Type string
Requiredfalse
cloningMethod
Method or protocol used for DNA cloning
See also http://terms.tdwg.org/wiki/ggbn:cloningMethod
Examples:
Qualified Namehttp://data.ggbn.org/schemas/ggbn/terms/cloningMethod
Namespacehttp://data.ggbn.org/schemas/ggbn/terms/
GroupCloning
Data Type string
Requiredfalse
cloneStrain
Name of the individual DNA clone
See also http://terms.tdwg.org/wiki/ggbn:cloneStrain
Examples:
Qualified Namehttp://data.ggbn.org/schemas/ggbn/terms/cloneStrain
Namespacehttp://data.ggbn.org/schemas/ggbn/terms/
GroupCloning
Data Type string
Requiredfalse
primerNameForward
Name of forward primer used for this cloning
See also http://terms.tdwg.org/wiki/ggbn:primerNameForward
Examples:
Qualified Namehttp://data.ggbn.org/schemas/ggbn/terms/primerNameForward
Namespacehttp://data.ggbn.org/schemas/ggbn/terms/
GroupCloning
Data Type string
Requiredfalse
primerReferenceCitationForward
link to the first reference of this cloning primer
See also http://terms.tdwg.org/wiki/ggbn:primerReferenceCitationForward
Examples:
Qualified Namehttp://data.ggbn.org/schemas/ggbn/terms/primerReferenceCitationForward
Namespacehttp://data.ggbn.org/schemas/ggbn/terms/
GroupCloning
Data Type string
Requiredfalse
primerReferenceLinkForward
Link to the first reference of this cloning primer
See also http://terms.tdwg.org/wiki/ggbn:primerReferenceLinkForward
Examples:
Qualified Namehttp://data.ggbn.org/schemas/ggbn/terms/primerReferenceLinkForward
Namespacehttp://data.ggbn.org/schemas/ggbn/terms/
GroupCloning
Data Type uri
Requiredfalse
primerNameReverse
Name of reverse primer used for this cloning
See also http://terms.tdwg.org/wiki/ggbn:primerNameReverse
Examples:
Qualified Namehttp://data.ggbn.org/schemas/ggbn/terms/primerNameReverse
Namespacehttp://data.ggbn.org/schemas/ggbn/terms/
GroupCloning
Data Type string
Requiredfalse
primerReferenceCitationReverse
link to the first reference of this cloning primer
See also http://terms.tdwg.org/wiki/ggbn:primerReferenceCitationReverse
Examples:
Qualified Namehttp://data.ggbn.org/schemas/ggbn/terms/primerReferenceCitationReverse
Namespacehttp://data.ggbn.org/schemas/ggbn/terms/
GroupCloning
Data Type string
Requiredfalse
primerReferenceLinkReverse
Link to the first reference of this cloning primer
See also http://terms.tdwg.org/wiki/ggbn:primerReferenceLinkReverse
Examples:
Qualified Namehttp://data.ggbn.org/schemas/ggbn/terms/primerReferenceLinkReverse
Namespacehttp://data.ggbn.org/schemas/ggbn/terms/
GroupCloning
Data Type uri
Requiredfalse
lib_reads_seqd
Total number of clones sequenced from the library
See also http://gensc.org/ns/mixs/#lib_reads_seqd
Examples:
Qualified Namehttp://gensc.org/ns/mixs/lib_reads_seqd
Namespacehttp://gensc.org/ns/mixs/
GroupCloning
Data Type string
Requiredfalse
lib_screen
Specific enrichment or screening methods applied before and/or after creating clone libraries in order to select a specific group of sequences e.g. enriched, screened, normalized
See also http://gensc.org/ns/mixs/#lib_screen
Examples:
Qualified Namehttp://gensc.org/ns/mixs/lib_screen
Namespacehttp://gensc.org/ns/mixs/
GroupCloning
Data Type string
Requiredfalse
lib_size
Total number of clones in the library prepared for the project
See also http://gensc.org/ns/mixs/#lib_size
Examples:
Qualified Namehttp://gensc.org/ns/mixs/lib_size
Namespacehttp://gensc.org/ns/mixs/
GroupCloning
Data Type string
Requiredfalse
lib_vector
Cloning vector type(s) used in construction of libraries
See also http://gensc.org/ns/mixs/#lib_vector
Examples:
Qualified Namehttp://gensc.org/ns/mixs/lib_vector
Namespacehttp://gensc.org/ns/mixs/
GroupCloning
Data Type string
Requiredfalse
lib_const_meth
Library construction method used for clone libraries e.g. paired-end,single,vector
See also http://gensc.org/ns/mixs/#lib_const_meth
Examples:
Qualified Namehttp://gensc.org/ns/mixs/lib_const_meth
Namespacehttp://gensc.org/ns/mixs/
GroupCloning
Data Type string
Requiredfalse
plasmid
Name of plasmid used for sequencing
See also http://terms.tdwg.org/wiki/ggbn:plasmid
Examples:
Qualified Namehttp://data.ggbn.org/schemas/ggbn/terms/plasmid
Namespacehttp://data.ggbn.org/schemas/ggbn/terms/
GroupCloning
Data Type string
Requiredfalse